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MS-Filter
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Charge Filter
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10 and above
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Spectrum Level Filter
Fragment M/Zs
Min Matches
Diff MZ 1
0
1
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7
8
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10
11
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Diff MZ 2
0
1
2
3
4
5
6
7
8
9
10
11
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13
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Loss Composition
Instrument
ESI-Q-TOF
ESI-Q-high-res
ESI-ION-TRAP-low-res
ESI-FT-ICR-CID
ESI-FT-ICR-ECD
ESI-ETD-low-res
ESI-ETD-high-res
ESI-EThcD-high-res
MALDI-Q-TOF
MALDI-TOFTOF
Masses are
monoisotopic
average
Parent Tol
Da
%
ppm
mmu
Sys Err
Frag Tol
Da
%
ppm
mmu
Match Charge
Max MSMS Pks
Max MSMS Pks / 100 Da
Unprocessed MSMS
Whole Range
Keep Spectra Matching Criteria
Remove Spectra Matching Criteria
Create Both Sets of Spectra
Don't Create Filtered Peak List
Scan Sort
Report
Output
HTML
XML
Tab delimited text
Name
[
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Report Options
Report Sorting
Level 1 Col Num
Undefined
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
Alphabetic
Natural
Numeric
SLIP Score
Ascending
Descending
Level 4 Col Num
Undefined
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
Alphabetic
Natural
Numeric
SLIP Score
Ascending
Descending
Level 2 Col Num
Undefined
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
Alphabetic
Natural
Numeric
SLIP Score
Ascending
Descending
Level 5 Col Num
Undefined
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
Alphabetic
Natural
Numeric
SLIP Score
Ascending
Descending
Level 3 Col Num
Undefined
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
Alphabetic
Natural
Numeric
SLIP Score
Ascending
Descending
Level 6 Col Num
Undefined
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
Alphabetic
Natural
Numeric
SLIP Score
Ascending
Descending
[
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Glycosylation Options
Y0 List
N-glycosylation CID Human
N-glycosylation CID Human+Cation:K
N-glycosylation CID Human+Cation:Na
N-glycosylation CID Human+Cation:N(1)H(4)
N-glycosylation CID Human+Cation:Ca[II]
N-glycosylation CID Human+Cation:Fe[III]
N-glycosylation CID Human+Cation:Al[III]
N-glycosylation CID Human+Formyl
N-glycosylation CID Human+Incorrect Mono 1Da
N-glycosylation CID Mammals
N-glycosylation CID Mammals+Cation:K
N-glycosylation CID Mammals+Cation:Na
N-glycosylation CID Mammals+Cation:N(1)H(4)
N-glycosylation CID Mammals+Cation:Ca[II]
N-glycosylation CID Mammals+Cation:Fe[III]
N-glycosylation CID Mammals+Cation:Al[III]
N-glycosylation CID Mammals+Formyl
N-glycosylation CID Mammals+Incorrect Mono 1Da
N-glycosylation CID Non-Sialylated
N-glycosylation CID Non-Sialylated+Cation:K
N-glycosylation CID Non-Sialylated+Cation:Na
N-glycosylation CID Non-Sialylated+Cation:N(1)H(4)
N-glycosylation CID Non-Sialylated+Cation:Ca[II]
N-glycosylation CID Non-Sialylated+Cation:Fe[III]
N-glycosylation CID Non-Sialylated+Cation:Al[III]
N-glycosylation CID Non-Sialylated+Formyl
N-glycosylation CID Non-Sialylated+Incorrect Mono 1Da
N-glycosylation CID Sialylated
N-glycosylation CID Sialylated+Cation:K
N-glycosylation CID Sialylated+Cation:Na
N-glycosylation CID Sialylated+Cation:N(1)H(4)
N-glycosylation CID Sialylated+Cation:Ca[II]
N-glycosylation CID Sialylated+Cation:Fe[III]
N-glycosylation CID Sialylated+Cation:Al[III]
N-glycosylation CID Sialylated+Formyl
N-glycosylation CID Sialylated+Incorrect Mono 1Da
N-glycosylation ExD Human
N-glycosylation ExD Human+Cation:K
N-glycosylation ExD Human+Cation:Na
N-glycosylation ExD Human+Cation:N(1)H(4)
N-glycosylation ExD Human+Cation:Ca[II]
N-glycosylation ExD Human+Cation:Fe[III]
N-glycosylation ExD Human+Cation:Al[III]
N-glycosylation ExD Human+Formyl
N-glycosylation ExD Human+Incorrect Mono 1Da
N-glycosylation ExD Mammals
N-glycosylation ExD Mammals+Cation:K
N-glycosylation ExD Mammals+Cation:Na
N-glycosylation ExD Mammals+Cation:N(1)H(4)
N-glycosylation ExD Mammals+Cation:Ca[II]
N-glycosylation ExD Mammals+Cation:Fe[III]
N-glycosylation ExD Mammals+Cation:Al[III]
N-glycosylation ExD Mammals+Formyl
N-glycosylation ExD Mammals+Incorrect Mono 1Da
N-glycosylation ExD Non-Sialylated
N-glycosylation ExD Non-Sialylated+Cation:K
N-glycosylation ExD Non-Sialylated+Cation:Na
N-glycosylation ExD Non-Sialylated+Cation:N(1)H(4)
N-glycosylation ExD Non-Sialylated+Cation:Ca[II]
N-glycosylation ExD Non-Sialylated+Cation:Fe[III]
N-glycosylation ExD Non-Sialylated+Cation:Al[III]
N-glycosylation ExD Non-Sialylated+Formyl
N-glycosylation ExD Non-Sialylated+Incorrect Mono 1Da
N-glycosylation ExD Sialylated
N-glycosylation ExD Sialylated+Cation:K
N-glycosylation ExD Sialylated+Cation:Na
N-glycosylation ExD Sialylated+Cation:N(1)H(4)
N-glycosylation ExD Sialylated+Cation:Ca[II]
N-glycosylation ExD Sialylated+Cation:Fe[III]
N-glycosylation ExD Sialylated+Cation:Al[III]
N-glycosylation ExD Sialylated+Formyl
N-glycosylation ExD Sialylated+Incorrect Mono 1Da
O-glycosylation CID Human
O-glycosylation CID Human+Cation:K
O-glycosylation CID Human+Cation:Na
O-glycosylation CID Human+Cation:N(1)H(4)
O-glycosylation CID Human+Cation:Ca[II]
O-glycosylation CID Human+Cation:Fe[III]
O-glycosylation CID Human+Cation:Al[III]
O-glycosylation CID Human+Formyl
O-glycosylation CID Human+Incorrect Mono 1Da
O-glycosylation CID Mammals
O-glycosylation CID Mammals+Cation:K
O-glycosylation CID Mammals+Cation:Na
O-glycosylation CID Mammals+Cation:N(1)H(4)
O-glycosylation CID Mammals+Cation:Ca[II]
O-glycosylation CID Mammals+Cation:Fe[III]
O-glycosylation CID Mammals+Cation:Al[III]
O-glycosylation CID Mammals+Formyl
O-glycosylation CID Mammals+Incorrect Mono 1Da
O-glycosylation CID Non-Sialylated
O-glycosylation CID Non-Sialylated+Cation:K
O-glycosylation CID Non-Sialylated+Cation:Na
O-glycosylation CID Non-Sialylated+Cation:N(1)H(4)
O-glycosylation CID Non-Sialylated+Cation:Ca[II]
O-glycosylation CID Non-Sialylated+Cation:Fe[III]
O-glycosylation CID Non-Sialylated+Cation:Al[III]
O-glycosylation CID Non-Sialylated+Formyl
O-glycosylation CID Non-Sialylated+Incorrect Mono 1Da
O-glycosylation CID Sialylated
O-glycosylation CID Sialylated+Cation:K
O-glycosylation CID Sialylated+Cation:Na
O-glycosylation CID Sialylated+Cation:N(1)H(4)
O-glycosylation CID Sialylated+Cation:Ca[II]
O-glycosylation CID Sialylated+Cation:Fe[III]
O-glycosylation CID Sialylated+Cation:Al[III]
O-glycosylation CID Sialylated+Formyl
O-glycosylation CID Sialylated+Incorrect Mono 1Da
O-glycosylation ExD Human
O-glycosylation ExD Human+Cation:K
O-glycosylation ExD Human+Cation:Na
O-glycosylation ExD Human+Cation:N(1)H(4)
O-glycosylation ExD Human+Cation:Ca[II]
O-glycosylation ExD Human+Cation:Fe[III]
O-glycosylation ExD Human+Cation:Al[III]
O-glycosylation ExD Human+Formyl
O-glycosylation ExD Human+Incorrect Mono 1Da
O-glycosylation ExD Mammals
O-glycosylation ExD Mammals+Cation:K
O-glycosylation ExD Mammals+Cation:Na
O-glycosylation ExD Mammals+Cation:N(1)H(4)
O-glycosylation ExD Mammals+Cation:Ca[II]
O-glycosylation ExD Mammals+Cation:Fe[III]
O-glycosylation ExD Mammals+Cation:Al[III]
O-glycosylation ExD Mammals+Formyl
O-glycosylation ExD Mammals+Incorrect Mono 1Da
O-glycosylation ExD Non-Sialylated
O-glycosylation ExD Non-Sialylated+Cation:K
O-glycosylation ExD Non-Sialylated+Cation:Na
O-glycosylation ExD Non-Sialylated+Cation:N(1)H(4)
O-glycosylation ExD Non-Sialylated+Cation:Ca[II]
O-glycosylation ExD Non-Sialylated+Cation:Fe[III]
O-glycosylation ExD Non-Sialylated+Cation:Al[III]
O-glycosylation ExD Non-Sialylated+Formyl
O-glycosylation ExD Non-Sialylated+Incorrect Mono 1Da
O-glycosylation ExD Sialylated
O-glycosylation ExD Sialylated+Cation:K
O-glycosylation ExD Sialylated+Cation:Na
O-glycosylation ExD Sialylated+Cation:N(1)H(4)
O-glycosylation ExD Sialylated+Cation:Ca[II]
O-glycosylation ExD Sialylated+Cation:Fe[III]
O-glycosylation ExD Sialylated+Cation:Al[III]
O-glycosylation ExD Sialylated+Formyl
O-glycosylation ExD Sialylated+Incorrect Mono 1Da
O-GlcNAc
O-GlcNAc+Cation:K
O-GlcNAc+Cation:Na
O-GlcNAc+Cation:N(1)H(4)
O-GlcNAc+Cation:Ca[II]
O-GlcNAc+Cation:Fe[III]
O-GlcNAc+Cation:Al[III]
O-GlcNAc+Formyl
O-GlcNAc+Incorrect Mono 1Da
Precursor Offset
0 to 1
0 to 2
0 to 3
-1 to 1
-1 to 2
-1 to 3
-2 to 1
-2 to 2
-2 to 3
Y0
Y1
Y2
+1
+2
+3
Min Mod Mass
MS-Viewer
Min Mod Matches
Matched Y0Y1
Max MSMS Pks
Max MSMS Pks / 100 Da
Unprocessed MSMS
Bond Score Max
Score Threshold MS-Tag
Glyco
All Hits
N Motif
Y0 Pep RT Tol
[
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Glycosylation Set Contents
[
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N-glycosylation CID Human
[
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N-glycosylation CID Mammals
[
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]
N-glycosylation CID Non-Sialylated
[
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N-glycosylation CID Sialylated
[
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N-glycosylation ExD Human
[
-
]
N-glycosylation ExD Mammals
[
-
]
N-glycosylation ExD Non-Sialylated
[
-
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N-glycosylation ExD Sialylated
[
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O-glycosylation CID Human
[
-
]
O-glycosylation CID Mammals
[
-
]
O-glycosylation CID Non-Sialylated
[
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O-glycosylation CID Sialylated
[
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O-glycosylation ExD Human
[
-
]
O-glycosylation ExD Mammals
[
-
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O-glycosylation ExD Non-Sialylated
[
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]
O-glycosylation ExD Sialylated
[
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]
O-GlcNAc
[
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]
Cleavable Crosslinker Options
Fragment Ion Pair Delta
Elem Comp
Match Z
Min Deltas
Intact Pep Pairs
Delta Elem Comp
Offset Elem Comp
Match Z
+1Da
+2Da
Min Mass
Peak List File
